Interoperability services

Name of service Description ELIXIR Node
BYOD events

Events with experts from different fields with as goal to make particular data sources FAIR by turning them into Linked Data.

ELIXIR Netherlands
Consultancy and Support Services

Conceptual modelling, especially OntoUML, UML, BORM, DEMO and BPMN and consultancy. Software solutions design, software development and consultancy.

ELIXIR Czech Republic
Consulting/Expertise

Expertise on very diverse subjects of data processing, analysis and curation as well as connections to existing infrastructure RI's like EUDAT. This expertise can be made available to research projects and organisations.  

ELIXIR Netherlands
FAIR

Data publication technology/tooling based on Linked Data, with associated data management processes. See the FAIR data tools.

ELIXIR Netherlands
FAIRsharing

An information and educational resource of inter-related data standards, databases and policies. 

ELIXIR UK
g:Profiler

g:Profiler is a bioinformatics toolkit for characterising and manipulating gene lists of high-throughput genomic data.

ELIXIR Estonia
Gene Ontology

The Gene Ontology (GO) project addresses the need for consistent descriptions of gene products across databases. It has developed three structured, controlled vocabularies (ontologies) that describe gene products.

EMBL-EBI
Identifiers.org

Identifiers.org is a system providing resolvable persistent URIs used to identify data for the scientific community, with a current focus on the Life Sciences domain.

EMBL-EBI
InterMine

A database framework widely used to support model organism databases. 

ELIXIR UK
ISA Tools Commons

A suite of open source tools and formats to enable standards-compliant collection, curation, management, publication and reuse of experiments. 

ELIXIR UK
The Ontology Lookup Service (OLS)

The Ontology Lookup Service (OLS) provides a web service interface to query multiple ontologies from a single location with a unified output format.

EMBL-EBI
Tools for FAIRification

Diverse tools under development, in use in BYOD events to facilitate making data FAIR using linked data technology.

ELIXIR Netherlands